Interaction cost and shotgun profiling
نویسندگان
چکیده
منابع مشابه
Shotgun microbial profiling of fossil remains.
Millions to billions of DNA sequences can now be generated from ancient skeletal remains thanks to the massive throughput of next-generation sequencing platforms. Except in cases of exceptional endogenous DNA preservation, most of the sequences isolated from fossil material do not originate from the specimen of interest, but instead reflect environmental organisms that colonized the specimen af...
متن کاملPALADIN: protein alignment for functional profiling whole metagenome shotgun data
Motivation Whole metagenome shotgun sequencing is a powerful approach for assaying the functional potential of microbial communities. We currently lack tools that efficiently and accurately align DNA reads against protein references, the technique necessary for constructing a functional profile. Here, we present PALADIN-a novel modification of the Burrows-Wheeler Aligner that provides accurate ...
متن کاملCorrection: Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing
Human saliva is clinically informative of both oral and general health. Since next generation shotgun sequencing (NGS) is now widely used to identify and quantify bacteria, we investigated the bacterial flora of saliva microbiomes of two healthy volunteers and five datasets from the Human Microbiome Project, along with a control dataset containing short NGS reads from bacterial species represen...
متن کاملCost and profit driven cloud-P2P interaction
I consider two scenarios of prospective P2PCloud interaction. In the first one, client peers are interested in sharing video content with the help of the cloud. Due to a limited monetary budget, only a small fraction of the clients can have the content delivered directly via the cloud servers. The rest need to engage in a mesh-pull P2P broadcast to exchange the content among them. I propose a n...
متن کاملInteraction cost of nonlocal gates.
We introduce the interaction cost of a nonlocal gate as the minimal time of interaction required to perform the gate when assisting the process with fast local unitaries. This cost, of interest both in the areas of quantum control and quantum information, depends on the specific interaction, and allows one to compare in an operationally meaningful manner any two nonlocal gates. In the case of a...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: ACM Transactions on Architecture and Code Optimization
سال: 2004
ISSN: 1544-3566,1544-3973
DOI: 10.1145/1022969.1022971